Dashboard: RNAcentral Dashboard
This dashboard answers the following questions:
- How many chemical components are present in the RNAcentral database?
- What is the total count of databases contributing their data to RNAcentral?
- Which databases have the highest number of sequences?
- How are RNA modifications distributed across different types?
- What are the trends in RNA interactions as classified by taxonomic IDs?
This dashboard contains 3 cards.
Usage
Install the mod:
mkdir dashboardscd dashboardspowerpipe mod initpowerpipe mod install github.com/turbot/powerpipe-mod-rnacentralStart the Powerpipe server:
powerpipe serverOpen http://localhost:9033 in your browser and select RNAcentral Dashboard dashboard.
You could also snapshot and share results via Turbot Pipes:
powerpipe loginpowerpipe dashboard run rnacentral.dashboard.rnacentral --shareQueries
The dashboard uses the named queries:
- rnacentral_chemical_components_distribution
- rnacentral_databases_by_num_organisms
- rnacentral_databases_by_num_sequences
- rnacentral_feedback_distribution_by_assembly
- rnacentral_feedback_overlap_analysis
- rnacentral_interactions_by_taxid
- rnacentral_modifications_distribution
- rnacentral_total_chemical_components
- rnacentral_total_databases
- rnacentral_total_interactions
- rnacentral_unique_interactions_per_interacting_id